Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC9.17□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC9.17□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AP002414.3-201ENST00000589352 1468 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PI4KAP2-201ENST00000360806 2080 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MRPL37P1-201ENST00000592451 1337 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AL645937.2-201ENST00000396808 931 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 IGLL3P-201ENST00000412472 434 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC112191.1-201ENST00000523689 701 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 UNC93B6-202ENST00000528242 690 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 IFNL4P1-201ENST00000607083 540 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 NPAP1P7-201ENST00000613027 823 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC007614.4-201ENST00000564048 1827 ntBASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms