Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 AC016694.1-201ENST00000434179 700 ntBASIC13.12□□□□□ -0.31
TMEM129A0AVI4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 AC244669.2-201ENST00000612320 853 ntBASIC13.12□□□□□ -0.31
TMEM129A0AVI4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 AC139712.1-201ENST00000378256 1875 ntBASIC13.12□□□□□ -0.31
TMEM129A0AVI4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM129A0AVI4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RNU1-114P-201ENST00000365297 166 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RPL7P3-201ENST00000441388 714 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AC114812.1-204ENST00000449669 728 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 KLF2P4-201ENST00000451959 1225 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 CTBP2P5-201ENST00000454986 1264 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 GCOM2-201ENST00000509133 1104 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 KRT18P8-201ENST00000581937 1246 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AC133552.6-201ENST00000613406 534 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AC145423.3-201ENST00000615987 467 ntBASIC13.11□□□□□ -0.31
TMEM129A0AVI4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms