Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 RPS9P1-201ENST00000419943 583 ntBASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 RN7SL277P-201ENST00000481521 288 ntBASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 IGLV3-15-201ENST00000518356 244 ntBASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 AC093752.3-201ENST00000567343 901 ntBASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 MIR3677-201ENST00000578964 60 ntBASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 AC012617.1-204ENST00000586340 2305 ntBASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 CAP2P1-201ENST00000557743 1390 ntBASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 DUX4L50-201ENST00000455245 715 ntBASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 RN7SL530P-201ENST00000485097 298 ntBASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 AC008723.1-201ENST00000506922 207 ntBASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 TCAM1P-207ENST00000485295 1537 ntBASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 FAM90A2P-201ENST00000511144 1395 ntBASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 FAM90A25P-201ENST00000528404 1395 ntBASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20BQ9P0W2 AC126755.1-201ENST00000525846 6405 ntBASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 LINC01230-201ENST00000625222 3017 ntBASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 RPL8P2-201ENST00000430538 502 ntBASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 RPSAP15-201ENST00000448168 861 ntBASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms