Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 USP17L6P-201ENST00000382470 1197 ntBASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 RN7SL351P-201ENST00000469306 248 ntBASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 U3.5-201ENST00000363448 216 ntBASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 RPSAP12-201ENST00000435879 888 ntBASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 MIR8071-1-201ENST00000616769 65 ntBASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 MIR8071-2-201ENST00000616772 65 ntBASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SLC52A1Q9NWF4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 GGTLC4P-201ENST00000402176 664 ntBASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 CICP14-201ENST00000629111 2732 ntBASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A1Q9NWF4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
SLC52A1Q9NWF4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.14■□□□□ 0.82
SLC52A1Q9NWF4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC52A1Q9NWF4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms