Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.63■□□□□ 0.25
ARID3AQ99856 AL591122.2-201ENST00000624125 1853 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ARID3AQ99856 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ARID3AQ99856 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ARID3AQ99856 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ARID3AQ99856 FAM90A12P-201ENST00000519497 2375 ntBASIC16.62■□□□□ 0.25
ARID3AQ99856 FAM90A24P-201ENST00000520792 2369 ntBASIC16.62■□□□□ 0.25
ARID3AQ99856 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.62■□□□□ 0.25
ARID3AQ99856 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 RPL5P21-201ENST00000404620 815 ntBASIC16.62■□□□□ 0.25
ARID3AQ99856 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ARID3AQ99856 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.62■□□□□ 0.25
ARID3AQ99856 AC055876.2-201ENST00000531834 546 ntBASIC16.62■□□□□ 0.25
ARID3AQ99856 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.62■□□□□ 0.25
ARID3AQ99856 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.62■□□□□ 0.25
ARID3AQ99856 AC004233.3-201ENST00000607794 1269 ntBASIC16.62■□□□□ 0.25
ARID3AQ99856 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.62■□□□□ 0.25
ARID3AQ99856 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.62■□□□□ 0.25
ARID3AQ99856 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC16.62■□□□□ 0.25
ARID3AQ99856 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ARID3AQ99856 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARID3AQ99856 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC16.62■□□□□ 0.25
ARID3AQ99856 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC16.62■□□□□ 0.25
ARID3AQ99856 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
ARID3AQ99856 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ARID3AQ99856 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.61■□□□□ 0.25
ARID3AQ99856 API5-211ENST00000534695 560 ntTSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.61■□□□□ 0.25
ARID3AQ99856 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
ARID3AQ99856 AL662799.1-202ENST00000614205 422 ntBASIC16.61■□□□□ 0.25
ARID3AQ99856 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.61■□□□□ 0.25
ARID3AQ99856 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARID3AQ99856 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARID3AQ99856 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.6■□□□□ 0.25
ARID3AQ99856 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARID3AQ99856 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms