Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 KCP-203ENST00000610776 5108 ntTSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 AL353770.1-201ENST00000614915 403 ntBASIC19.25■□□□□ 0.67
CFAP53Q96M91 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 AC152010.1-201ENST00000415779 2006 ntBASIC19.24■□□□□ 0.67
CFAP53Q96M91 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.24■□□□□ 0.67
CFAP53Q96M91 AL512310.5-201ENST00000551999 515 ntBASIC19.24■□□□□ 0.67
CFAP53Q96M91 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 MIR4754-201ENST00000582477 89 ntBASIC19.24■□□□□ 0.67
CFAP53Q96M91 AC097724.1-201ENST00000609581 426 ntBASIC19.24■□□□□ 0.67
CFAP53Q96M91 LINC01783-202ENST00000614408 828 ntBASIC19.24■□□□□ 0.67
CFAP53Q96M91 BX284668.2-205ENST00000619677 828 ntBASIC19.24■□□□□ 0.67
CFAP53Q96M91 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP53Q96M91 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CFAP53Q96M91 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP53Q96M91 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP53Q96M91 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP53Q96M91 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP53Q96M91 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP53Q96M91 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP53Q96M91 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP53Q96M91 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 RPS9P1-201ENST00000419943 583 ntBASIC19.23■□□□□ 0.67
CFAP53Q96M91 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 RN7SL258P-201ENST00000478664 300 ntBASIC19.23■□□□□ 0.67
CFAP53Q96M91 RN7SL720P-201ENST00000488178 304 ntBASIC19.23■□□□□ 0.67
CFAP53Q96M91 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 CHMP4BP1-201ENST00000556017 588 ntBASIC19.23■□□□□ 0.67
CFAP53Q96M91 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.23■□□□□ 0.67
CFAP53Q96M91 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms