Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AL138799.1-201ENST00000448213 1675 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 PI4KAP2-201ENST00000360806 2080 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 CSPG4P11-201ENST00000560634 4910 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AC064801.2-201ENST00000625052 1303 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.67
NUP35Q8NFH5 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 USP17L6P-201ENST00000382470 1197 ntBASIC10.83□□□□□ -0.68
NUP35Q8NFH5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 AK2P2-201ENST00000439142 405 ntBASIC10.83□□□□□ -0.68
NUP35Q8NFH5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 PTPRVP-205ENST00000641549 5067 ntBASIC10.83□□□□□ -0.68
NUP35Q8NFH5 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 CETN4P-206ENST00000642099 2168 ntBASIC10.83□□□□□ -0.68
NUP35Q8NFH5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NUP35Q8NFH5 AP001972.5-201ENST00000624624 2338 ntBASIC10.83□□□□□ -0.68
NUP35Q8NFH5 AC022497.1-201ENST00000624916 3691 ntBASIC10.82□□□□□ -0.68
NUP35Q8NFH5 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms