Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 AC106881.1-201ENST00000605849 3329 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 AC006486.2-201ENST00000624246 2199 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 ISCA2P1-201ENST00000425548 448 ntBASIC15.27■□□□□ 0.04
TTC16Q8NEE8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC131206.1-201ENST00000538078 1211 ntBASIC15.27■□□□□ 0.04
TTC16Q8NEE8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC009779.1-201ENST00000551138 283 ntBASIC15.27■□□□□ 0.04
TTC16Q8NEE8 RBM8B-201ENST00000555532 525 ntBASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 MIR3907-201ENST00000579424 151 ntBASIC15.27■□□□□ 0.04
TTC16Q8NEE8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC020922.3-201ENST00000595064 547 ntBASIC15.27■□□□□ 0.04
TTC16Q8NEE8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AC244517.3-201ENST00000616254 1235 ntBASIC15.27■□□□□ 0.04
TTC16Q8NEE8 Z98259.2-201ENST00000641583 609 ntBASIC15.27■□□□□ 0.04
TTC16Q8NEE8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.27■□□□□ 0.03
TTC16Q8NEE8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC16Q8NEE8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TTC16Q8NEE8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TTC16Q8NEE8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TTC16Q8NEE8 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC16Q8NEE8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC16Q8NEE8 AC092135.3-201ENST00000624151 1846 ntBASIC15.27■□□□□ 0.03
TTC16Q8NEE8 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 AC006504.5-208ENST00000588784 2401 ntBASIC15.26■□□□□ 0.03
TTC16Q8NEE8 TP73-211ENST00000604074 4806 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 HLA-J-204ENST00000495278 958 ntBASIC15.26■□□□□ 0.03
TTC16Q8NEE8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 RN7SL190P-201ENST00000582519 257 ntBASIC15.26■□□□□ 0.03
TTC16Q8NEE8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 AC008825.2-201ENST00000603374 718 ntBASIC15.26■□□□□ 0.03
TTC16Q8NEE8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 AC079336.7-201ENST00000623428 1078 ntBASIC15.26■□□□□ 0.03
TTC16Q8NEE8 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC16Q8NEE8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms