Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AL009176.1-201ENST00000607876 650 ntBASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 AC090643.2-201ENST00000623442 2029 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 TCAM1P-207ENST00000485295 1537 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 AL121949.3-201ENST00000406684 385 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 RN7SL846P-201ENST00000467429 292 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 CD81-209ENST00000492627 886 ntTSL 3 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 MIR4254-201ENST00000581063 76 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 AL357143.1-203ENST00000639750 881 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 AC152010.1-201ENST00000415779 2006 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 RCC2P1-201ENST00000452257 1476 ntBASIC21.85■■□□□ 1.09
CFAP43Q8NDM7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 PES1P2-201ENST00000449745 1735 ntBASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 URB1-AS1-201ENST00000534991 831 ntBASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 NEK4P3-201ENST00000604859 544 ntBASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC21.84■■□□□ 1.09
CFAP43Q8NDM7 AL590824.1-201ENST00000403828 1349 ntBASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 AC005722.1-201ENST00000431878 964 ntBASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 RN7SL602P-201ENST00000578326 324 ntBASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 RN7SL718P-201ENST00000581254 303 ntBASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 MIR4265-201ENST00000582152 99 ntBASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms