Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 AL645933.1-201ENST00000440087 609 ntBASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 MARK2P5-201ENST00000507649 634 ntBASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 SCARNA21-201ENST00000517026 139 ntBASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 AP000346.4-201ENST00000614827 381 ntBASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM48Q8IWZ4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 FGD5P1-202ENST00000614866 2498 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AC005912.2-201ENST00000619492 2400 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 KRT8P28-201ENST00000433288 1390 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 CYP46A4P-201ENST00000414953 267 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AC125604.1-201ENST00000496255 707 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 RCC2P8-201ENST00000502779 1035 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AC090857.1-201ENST00000527400 390 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AL160314.3-201ENST00000556041 767 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AC133540.1-201ENST00000620845 1019 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AC136759.1-202ENST00000530858 2194 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 AL590440.2-201ENST00000641973 1595 ntBASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM48Q8IWZ4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.25□□□□□ -0.13
TRIM48Q8IWZ4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms