Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AL135901.1-201ENST00000451812 333 ntBASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AC012158.2-201ENST00000536546 354 ntBASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 MIR2392-201ENST00000584881 84 ntBASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 LINC00528-201ENST00000600723 2160 ntBASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 DGAT2L7P-201ENST00000602462 744 ntBASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AC009560.1-201ENST00000620208 434 ntBASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RP1L1Q8IWN7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
RP1L1Q8IWN7 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RP1L1Q8IWN7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RP1L1Q8IWN7 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.15□□□□□ -0.31
RP1L1Q8IWN7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 SSR4P1-203ENST00000599569 2260 ntBASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 KRT17P4-201ENST00000429445 819 ntBASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 EIF5AP2-201ENST00000585668 1047 ntBASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC139749.1-202ENST00000617529 3139 ntBASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC006548.2-201ENST00000605217 529 ntBASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RP1L1Q8IWN7 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms