Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 RN7SL455P-201ENST00000580629 282 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AP005264.6-204ENST00000588436 719 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 RN7SL832P-201ENST00000607781 1756 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 PDXDC2P-206ENST00000534700 1315 ntBASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 FAM86B3P-203ENST00000523992 854 ntBASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 AC012073.1-201ENST00000606114 1108 ntBASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.28■□□□□ 0.04
NPAS4Q8IUM7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 CICP14-201ENST00000629111 2732 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 SHMT1P1-201ENST00000419974 1312 ntBASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS4Q8IUM7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms