Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 MIR600HG-201ENST00000449175 5984 ntBASIC16.91■□□□□ 0.3
IRX3P78415 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 OR2I1P-210ENST00000642037 4691 ntBASIC16.91■□□□□ 0.3
IRX3P78415 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IRX3P78415 AC009093.10-201ENST00000641956 1442 ntBASIC16.9■□□□□ 0.3
IRX3P78415 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 Z69890.1-201ENST00000382990 339 ntBASIC16.9■□□□□ 0.3
IRX3P78415 OR2R1P-201ENST00000441404 914 ntBASIC16.9■□□□□ 0.3
IRX3P78415 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.9■□□□□ 0.3
IRX3P78415 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.9■□□□□ 0.3
IRX3P78415 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.9■□□□□ 0.3
IRX3P78415 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 MIR4649-201ENST00000582839 64 ntBASIC16.9■□□□□ 0.3
IRX3P78415 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 AC092135.3-201ENST00000624151 1846 ntBASIC16.9■□□□□ 0.3
IRX3P78415 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.9■□□□□ 0.3
IRX3P78415 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IRX3P78415 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX3P78415 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
IRX3P78415 KRT8P28-201ENST00000433288 1390 ntBASIC16.89■□□□□ 0.3
IRX3P78415 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.89■□□□□ 0.3
IRX3P78415 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
IRX3P78415 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.89■□□□□ 0.3
IRX3P78415 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
IRX3P78415 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
IRX3P78415 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 AC126335.2-201ENST00000623362 4637 ntBASIC16.89■□□□□ 0.29
IRX3P78415 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 CICP8-201ENST00000455800 2813 ntBASIC16.89■□□□□ 0.29
IRX3P78415 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 LINC01101-201ENST00000622953 1884 ntBASIC16.89■□□□□ 0.29
IRX3P78415 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX3P78415 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.89■□□□□ 0.29
IRX3P78415 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX3P78415 NDUFS6P1-201ENST00000485187 316 ntBASIC16.89■□□□□ 0.29
IRX3P78415 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
IRX3P78415 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.89■□□□□ 0.29
IRX3P78415 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX3P78415 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX3P78415 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 AC025271.4-201ENST00000621477 1726 ntBASIC16.89■□□□□ 0.29
IRX3P78415 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
IRX3P78415 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX3P78415 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.89■□□□□ 0.29
IRX3P78415 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX3P78415 SSR4P1-203ENST00000599569 2260 ntBASIC16.89■□□□□ 0.29
IRX3P78415 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
IRX3P78415 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IRX3P78415 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms