Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.53□□□□□ -0.24
PSMD4P55036 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
PSMD4P55036 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PSMD4P55036 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
PSMD4P55036 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PSMD4P55036 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.53□□□□□ -0.24
PSMD4P55036 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PSMD4P55036 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PSMD4P55036 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PSMD4P55036 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PSMD4P55036 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PSMD4P55036 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PSMD4P55036 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PSMD4P55036 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.53□□□□□ -0.24
PSMD4P55036 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.53□□□□□ -0.24
PSMD4P55036 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PSMD4P55036 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PSMD4P55036 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.53□□□□□ -0.24
PSMD4P55036 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.53□□□□□ -0.24
PSMD4P55036 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.53□□□□□ -0.24
PSMD4P55036 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.53□□□□□ -0.24
PSMD4P55036 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.53□□□□□ -0.24
PSMD4P55036 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
PSMD4P55036 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PSMD4P55036 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PSMD4P55036 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PSMD4P55036 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
PSMD4P55036 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.52□□□□□ -0.24
PSMD4P55036 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PSMD4P55036 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PSMD4P55036 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.52□□□□□ -0.24
PSMD4P55036 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.52□□□□□ -0.24
PSMD4P55036 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.52□□□□□ -0.24
PSMD4P55036 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PSMD4P55036 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.52□□□□□ -0.25
PSMD4P55036 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.52□□□□□ -0.25
PSMD4P55036 MTX1P1-201ENST00000440904 838 ntBASIC13.52□□□□□ -0.25
PSMD4P55036 AC012441.2-201ENST00000444843 739 ntBASIC13.52□□□□□ -0.25
PSMD4P55036 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.52□□□□□ -0.25
PSMD4P55036 AC119751.2-201ENST00000504529 210 ntBASIC13.52□□□□□ -0.25
PSMD4P55036 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.52□□□□□ -0.25
PSMD4P55036 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.52□□□□□ -0.25
PSMD4P55036 RN7SL560P-201ENST00000577943 264 ntBASIC13.52□□□□□ -0.25
PSMD4P55036 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.52□□□□□ -0.25
PSMD4P55036 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
PSMD4P55036 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 AC136759.1-202ENST00000530858 2194 ntBASIC13.52□□□□□ -0.25
PSMD4P55036 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.52□□□□□ -0.25
PSMD4P55036 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.52□□□□□ -0.25
PSMD4P55036 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
PSMD4P55036 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
PSMD4P55036 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PSMD4P55036 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms