Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 BX640514.1-201ENST00000583223 1918 ntBASIC13.51□□□□□ -0.25
EFNA3P52797 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 FRMPD2B-201ENST00000431305 1347 ntBASIC13.5□□□□□ -0.25
EFNA3P52797 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.5□□□□□ -0.25
EFNA3P52797 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.5□□□□□ -0.25
EFNA3P52797 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.5□□□□□ -0.25
EFNA3P52797 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.5□□□□□ -0.25
EFNA3P52797 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.5□□□□□ -0.25
EFNA3P52797 RN7SL277P-201ENST00000481521 288 ntBASIC13.5□□□□□ -0.25
EFNA3P52797 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.5□□□□□ -0.25
EFNA3P52797 AC012044.1-201ENST00000603431 297 ntBASIC13.5□□□□□ -0.25
EFNA3P52797 MIR6074-201ENST00000612054 107 ntBASIC13.5□□□□□ -0.25
EFNA3P52797 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 AC090386.2-201ENST00000623010 1039 ntBASIC13.5□□□□□ -0.25
EFNA3P52797 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.5□□□□□ -0.25
EFNA3P52797 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 AC138969.2-201ENST00000532739 9932 ntBASIC13.5□□□□□ -0.25
EFNA3P52797 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
EFNA3P52797 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.5□□□□□ -0.25
EFNA3P52797 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
EFNA3P52797 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
EFNA3P52797 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 CICP16-201ENST00000502609 2813 ntBASIC13.49□□□□□ -0.25
EFNA3P52797 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.49□□□□□ -0.25
EFNA3P52797 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 LAP3P2-201ENST00000454686 1454 ntBASIC13.49□□□□□ -0.25
EFNA3P52797 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 RPS9P1-201ENST00000419943 583 ntBASIC13.49□□□□□ -0.25
EFNA3P52797 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 AC079328.1-201ENST00000560358 952 ntBASIC13.49□□□□□ -0.25
EFNA3P52797 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.49□□□□□ -0.25
EFNA3P52797 PHBP15-201ENST00000574228 665 ntBASIC13.49□□□□□ -0.25
EFNA3P52797 AC084346.2-201ENST00000607097 949 ntBASIC13.49□□□□□ -0.25
EFNA3P52797 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms