Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CPT1AP50416 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.83■□□□□ 0.12
CPT1AP50416 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CPT1AP50416 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.83■□□□□ 0.12
CPT1AP50416 AL139008.1-201ENST00000437894 228 ntBASIC15.83■□□□□ 0.12
CPT1AP50416 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 RN7SL396P-201ENST00000471086 295 ntBASIC15.83■□□□□ 0.12
CPT1AP50416 AC010234.1-201ENST00000494599 870 ntBASIC15.83■□□□□ 0.12
CPT1AP50416 AC093909.3-201ENST00000504783 336 ntBASIC15.83■□□□□ 0.12
CPT1AP50416 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.83■□□□□ 0.12
CPT1AP50416 IGHV1-12-201ENST00000518307 205 ntBASIC15.83■□□□□ 0.12
CPT1AP50416 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.83■□□□□ 0.12
CPT1AP50416 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.83■□□□□ 0.12
CPT1AP50416 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.83■□□□□ 0.12
CPT1AP50416 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.83■□□□□ 0.12
CPT1AP50416 MIR4265-201ENST00000582152 99 ntBASIC15.83■□□□□ 0.12
CPT1AP50416 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.83■□□□□ 0.12
CPT1AP50416 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.83■□□□□ 0.12
CPT1AP50416 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.83■□□□□ 0.12
CPT1AP50416 AL118522.1-201ENST00000611368 560 ntBASIC15.83■□□□□ 0.12
CPT1AP50416 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPT1AP50416 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.83■□□□□ 0.12
CPT1AP50416 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 AC019109.1-201ENST00000401725 1874 ntBASIC15.82■□□□□ 0.12
CPT1AP50416 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.82■□□□□ 0.12
CPT1AP50416 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.82■□□□□ 0.12
CPT1AP50416 AC103592.1-201ENST00000394513 664 ntBASIC15.82■□□□□ 0.12
CPT1AP50416 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.82■□□□□ 0.12
CPT1AP50416 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.82■□□□□ 0.12
CPT1AP50416 RN7SL375P-201ENST00000492442 298 ntBASIC15.82■□□□□ 0.12
CPT1AP50416 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.82■□□□□ 0.12
CPT1AP50416 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.82■□□□□ 0.12
CPT1AP50416 AC002472.4-201ENST00000641915 272 ntBASIC15.82■□□□□ 0.12
CPT1AP50416 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CPT1AP50416 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.82■□□□□ 0.12
CPT1AP50416 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.82■□□□□ 0.12
CPT1AP50416 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPT1AP50416 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.82■□□□□ 0.12
CPT1AP50416 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.81■□□□□ 0.12
CPT1AP50416 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms