Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.08■□□□□ 0
MMP13P45452 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
MMP13P45452 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.08■□□□□ 0
MMP13P45452 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.08■□□□□ 0
MMP13P45452 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.08■□□□□ 0
MMP13P45452 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.08■□□□□ 0
MMP13P45452 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.07■□□□□ 0
MMP13P45452 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
MMP13P45452 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 CR383656.2-201ENST00000548656 2254 ntBASIC15.07■□□□□ 0
MMP13P45452 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.07■□□□□ 0
MMP13P45452 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
MMP13P45452 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
MMP13P45452 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.07■□□□□ 0
MMP13P45452 YBX1P6-201ENST00000442962 1002 ntBASIC15.07■□□□□ 0
MMP13P45452 CHMP1AP1-201ENST00000445563 662 ntBASIC15.07■□□□□ 0
MMP13P45452 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.07■□□□□ 0
MMP13P45452 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.07■□□□□ 0
MMP13P45452 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.07■□□□□ 0
MMP13P45452 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.07■□□□□ 0
MMP13P45452 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 AP001002.3-201ENST00000623482 206 ntBASIC15.07■□□□□ 0
MMP13P45452 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
MMP13P45452 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.07■□□□□ 0
MMP13P45452 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.07■□□□□ 0
MMP13P45452 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP13P45452 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
MMP13P45452 AC015688.4-201ENST00000580780 1647 ntBASIC15.06■□□□□ 0
MMP13P45452 BEND3P3-201ENST00000611030 2440 ntBASIC15.06■□□□□ 0
MMP13P45452 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.06■□□□□ 0
MMP13P45452 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.06■□□□□ 0
MMP13P45452 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.06■□□□□ 0
MMP13P45452 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MMP13P45452 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
MMP13P45452 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.06■□□□□ 0
MMP13P45452 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.06■□□□□ 0
MMP13P45452 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.06■□□□□ 0
MMP13P45452 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.06■□□□□ 0
MMP13P45452 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.06■□□□□ 0
MMP13P45452 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.06■□□□□ 0
MMP13P45452 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.06■□□□□ 0
MMP13P45452 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MMP13P45452 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.06■□□□□ 0
MMP13P45452 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MMP13P45452 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP13P45452 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.06■□□□□ 0
MMP13P45452 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms