Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
COL15A1P39059 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL15A1P39059 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18■□□□□ 0.47
COL15A1P39059 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL15A1P39059 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL15A1P39059 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL15A1P39059 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18■□□□□ 0.47
COL15A1P39059 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL15A1P39059 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18■□□□□ 0.47
COL15A1P39059 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
COL15A1P39059 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL15A1P39059 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL15A1P39059 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COL15A1P39059 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COL15A1P39059 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL15A1P39059 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL15A1P39059 RPL3P2-204ENST00000413027 1203 ntBASIC18■□□□□ 0.47
COL15A1P39059 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18■□□□□ 0.47
COL15A1P39059 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18■□□□□ 0.47
COL15A1P39059 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18■□□□□ 0.47
COL15A1P39059 RN7SL375P-201ENST00000492442 298 ntBASIC18■□□□□ 0.47
COL15A1P39059 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18■□□□□ 0.47
COL15A1P39059 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18■□□□□ 0.47
COL15A1P39059 EIF5AP2-201ENST00000585668 1047 ntBASIC18■□□□□ 0.47
COL15A1P39059 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL15A1P39059 TP53-221ENST00000615910 1149 ntTSL 5 BASIC18■□□□□ 0.47
COL15A1P39059 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL15A1P39059 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
COL15A1P39059 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL15A1P39059 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.99■□□□□ 0.47
COL15A1P39059 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
COL15A1P39059 AC092573.1-201ENST00000433054 884 ntBASIC17.99■□□□□ 0.47
COL15A1P39059 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.99■□□□□ 0.47
COL15A1P39059 AC025186.1-201ENST00000478174 870 ntBASIC17.99■□□□□ 0.47
COL15A1P39059 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
COL15A1P39059 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.99■□□□□ 0.47
COL15A1P39059 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 MIR4265-201ENST00000582152 99 ntBASIC17.99■□□□□ 0.47
COL15A1P39059 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.99■□□□□ 0.47
COL15A1P39059 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL15A1P39059 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL15A1P39059 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL15A1P39059 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.99■□□□□ 0.47
COL15A1P39059 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.98■□□□□ 0.47
COL15A1P39059 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.98■□□□□ 0.47
COL15A1P39059 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 AC097359.2-201ENST00000604992 2389 ntBASIC17.98■□□□□ 0.47
COL15A1P39059 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.98■□□□□ 0.47
COL15A1P39059 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.98■□□□□ 0.47
COL15A1P39059 AC026470.1-201ENST00000478038 846 ntBASIC17.98■□□□□ 0.47
COL15A1P39059 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.98■□□□□ 0.47
COL15A1P39059 AC106047.2-201ENST00000511723 743 ntBASIC17.98■□□□□ 0.47
COL15A1P39059 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.98■□□□□ 0.47
COL15A1P39059 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
COL15A1P39059 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.98■□□□□ 0.47
COL15A1P39059 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.98■□□□□ 0.47
COL15A1P39059 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.98■□□□□ 0.47
COL15A1P39059 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.98■□□□□ 0.47
COL15A1P39059 RN7SL455P-201ENST00000580629 282 ntBASIC17.98■□□□□ 0.47
COL15A1P39059 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms