Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.27■□□□□ 0.04
RFC1P35251 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.27■□□□□ 0.04
RFC1P35251 Z98259.2-201ENST00000641583 609 ntBASIC15.27■□□□□ 0.04
RFC1P35251 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.27■□□□□ 0.03
RFC1P35251 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.27■□□□□ 0.03
RFC1P35251 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.27■□□□□ 0.03
RFC1P35251 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.27■□□□□ 0.03
RFC1P35251 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.27■□□□□ 0.03
RFC1P35251 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFC1P35251 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RFC1P35251 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.26■□□□□ 0.03
RFC1P35251 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RFC1P35251 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.26■□□□□ 0.03
RFC1P35251 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 OR8S1-201ENST00000310194 1080 ntBASIC15.26■□□□□ 0.03
RFC1P35251 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.26■□□□□ 0.03
RFC1P35251 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RFC1P35251 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.26■□□□□ 0.03
RFC1P35251 AL354877.1-201ENST00000424412 413 ntBASIC15.26■□□□□ 0.03
RFC1P35251 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RFC1P35251 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.26■□□□□ 0.03
RFC1P35251 BNIP3P42-201ENST00000454982 569 ntBASIC15.26■□□□□ 0.03
RFC1P35251 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.26■□□□□ 0.03
RFC1P35251 AC010328.2-201ENST00000597698 1111 ntBASIC15.26■□□□□ 0.03
RFC1P35251 BNIP3P29-201ENST00000598302 571 ntBASIC15.26■□□□□ 0.03
RFC1P35251 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.26■□□□□ 0.03
RFC1P35251 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.26■□□□□ 0.03
RFC1P35251 AC011447.5-201ENST00000616168 564 ntBASIC15.26■□□□□ 0.03
RFC1P35251 AC009542.2-202ENST00000619004 1067 ntBASIC15.26■□□□□ 0.03
RFC1P35251 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.26■□□□□ 0.03
RFC1P35251 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RFC1P35251 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RFC1P35251 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.26■□□□□ 0.03
RFC1P35251 AC015818.8-201ENST00000587907 1519 ntBASIC15.26■□□□□ 0.03
RFC1P35251 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFC1P35251 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RFC1P35251 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.25■□□□□ 0.03
RFC1P35251 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.25■□□□□ 0.03
RFC1P35251 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RFC1P35251 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.25■□□□□ 0.03
RFC1P35251 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFC1P35251 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 RNA5SP412-201ENST00000516234 123 ntBASIC15.25■□□□□ 0.03
RFC1P35251 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.25■□□□□ 0.03
RFC1P35251 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RFC1P35251 AC100827.2-201ENST00000563214 1194 ntBASIC15.25■□□□□ 0.03
RFC1P35251 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.25■□□□□ 0.03
RFC1P35251 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms