Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LSP1P33241 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSP1P33241 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LSP1P33241 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSP1P33241 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LSP1P33241 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSP1P33241 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.54□□□□□ -0.08
LSP1P33241 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSP1P33241 DDX12P-201ENST00000432996 2947 ntBASIC14.54□□□□□ -0.08
LSP1P33241 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSP1P33241 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LSP1P33241 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LSP1P33241 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSP1P33241 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.54□□□□□ -0.08
LSP1P33241 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 AC022497.1-201ENST00000624916 3691 ntBASIC14.53□□□□□ -0.08
LSP1P33241 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 AC073862.5-201ENST00000624129 2027 ntBASIC14.53□□□□□ -0.08
LSP1P33241 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 AC108024.1-201ENST00000626286 1721 ntBASIC14.53□□□□□ -0.08
LSP1P33241 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 PDIA3P1-201ENST00000471856 1510 ntBASIC14.53□□□□□ -0.08
LSP1P33241 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LSP1P33241 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.53□□□□□ -0.08
LSP1P33241 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.53□□□□□ -0.08
LSP1P33241 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.53□□□□□ -0.08
LSP1P33241 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.53□□□□□ -0.08
LSP1P33241 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.53□□□□□ -0.08
LSP1P33241 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 AC004461.2-201ENST00000629517 803 ntBASIC14.53□□□□□ -0.08
LSP1P33241 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.53□□□□□ -0.08
LSP1P33241 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.53□□□□□ -0.08
LSP1P33241 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSP1P33241 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LSP1P33241 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
LSP1P33241 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.52□□□□□ -0.08
LSP1P33241 AL138799.1-201ENST00000448213 1675 ntBASIC14.52□□□□□ -0.08
LSP1P33241 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LSP1P33241 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.52□□□□□ -0.08
LSP1P33241 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.52□□□□□ -0.08
LSP1P33241 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LSP1P33241 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LSP1P33241 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
LSP1P33241 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSP1P33241 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms