Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.61□□□□□ -0.07
HLA-DPA1P20036 POM121L10P-201ENST00000436994 1285 ntBASIC14.61□□□□□ -0.07
HLA-DPA1P20036 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 AC005730.2-201ENST00000564549 1184 ntBASIC14.61□□□□□ -0.07
HLA-DPA1P20036 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 AC005324.6-201ENST00000587972 613 ntBASIC14.61□□□□□ -0.07
HLA-DPA1P20036 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.61□□□□□ -0.07
HLA-DPA1P20036 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 AL033527.4-201ENST00000641026 673 ntBASIC14.61□□□□□ -0.07
HLA-DPA1P20036 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 LAP3P2-201ENST00000454686 1454 ntBASIC14.61□□□□□ -0.07
HLA-DPA1P20036 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 USP17L6P-201ENST00000382470 1197 ntBASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AC124068.2-201ENST00000569473 1109 ntBASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 CICP16-201ENST00000502609 2813 ntBASIC14.6□□□□□ -0.07
HLA-DPA1P20036 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DPA1P20036 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 304.2 ms