Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.96■□□□□ 0.15
COL11A1P12107 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
COL11A1P12107 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.96■□□□□ 0.15
COL11A1P12107 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL11A1P12107 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL11A1P12107 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL11A1P12107 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL11A1P12107 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.96■□□□□ 0.14
COL11A1P12107 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.96■□□□□ 0.14
COL11A1P12107 FAM21EP-201ENST00000417804 985 ntBASIC15.96■□□□□ 0.14
COL11A1P12107 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.96■□□□□ 0.14
COL11A1P12107 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.96■□□□□ 0.14
COL11A1P12107 RPL3P5-201ENST00000441645 1232 ntBASIC15.96■□□□□ 0.14
COL11A1P12107 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC15.96■□□□□ 0.14
COL11A1P12107 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL11A1P12107 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.96■□□□□ 0.14
COL11A1P12107 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL11A1P12107 FKBP4P8-201ENST00000610931 1369 ntBASIC15.96■□□□□ 0.14
COL11A1P12107 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL11A1P12107 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL11A1P12107 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL11A1P12107 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.95■□□□□ 0.14
COL11A1P12107 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.95■□□□□ 0.14
COL11A1P12107 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.95■□□□□ 0.14
COL11A1P12107 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
COL11A1P12107 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.95■□□□□ 0.14
COL11A1P12107 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.95■□□□□ 0.14
COL11A1P12107 AC087203.1-201ENST00000532111 1181 ntBASIC15.95■□□□□ 0.14
COL11A1P12107 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 AC026120.2-201ENST00000617239 309 ntBASIC15.95■□□□□ 0.14
COL11A1P12107 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL11A1P12107 AC090643.2-201ENST00000623442 2029 ntBASIC15.95■□□□□ 0.14
COL11A1P12107 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.95■□□□□ 0.14
COL11A1P12107 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
COL11A1P12107 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
COL11A1P12107 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 HLA-DMA-202ENST00000395303 1007 ntBASIC15.94■□□□□ 0.14
COL11A1P12107 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC15.94■□□□□ 0.14
COL11A1P12107 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.94■□□□□ 0.14
COL11A1P12107 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 AC005274.1-201ENST00000623460 802 ntBASIC15.94■□□□□ 0.14
COL11A1P12107 AC026336.4-201ENST00000624565 1050 ntBASIC15.94■□□□□ 0.14
COL11A1P12107 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.94■□□□□ 0.14
COL11A1P12107 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
COL11A1P12107 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.94■□□□□ 0.14
COL11A1P12107 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
COL11A1P12107 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.94■□□□□ 0.14
COL11A1P12107 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
COL11A1P12107 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.94■□□□□ 0.14
COL11A1P12107 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
COL11A1P12107 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL11A1P12107 MIR566-201ENST00000385187 94 ntBASIC15.94■□□□□ 0.14
COL11A1P12107 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.94■□□□□ 0.14
COL11A1P12107 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.94■□□□□ 0.14
COL11A1P12107 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.94■□□□□ 0.14
COL11A1P12107 VDAC1P11-201ENST00000458323 852 ntBASIC15.94■□□□□ 0.14
COL11A1P12107 AC027139.1-201ENST00000565286 951 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms