Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 ELK2AP-201ENST00000392510 1007 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 RPS6P14-201ENST00000425165 719 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 BTG3P1-201ENST00000435859 716 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 SPTLC1P5-201ENST00000450718 252 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 RNA5SP423-201ENST00000517127 109 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC079328.1-201ENST00000560358 952 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC022748.3-201ENST00000621828 275 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC015967.2-201ENST00000624092 234 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AL162426.1-201ENST00000624141 743 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC006435.4-201ENST00000625037 234 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AL356737.1-201ENST00000634391 234 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC009452.1-201ENST00000640823 606 ntBASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 AC104073.2-201ENST00000453737 312 ntBASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 RN7SL720P-201ENST00000488178 304 ntBASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 AC022217.1-201ENST00000521069 738 ntBASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CCNYL3P0C7X3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms