Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 AC069218.1-201ENST00000435269 762 ntBASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 FGFR3P1-201ENST00000449999 601 ntBASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 AC008267.1-201ENST00000474858 1069 ntBASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 AC027237.1-201ENST00000560942 655 ntBASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 COX6A1P2-201ENST00000620597 330 ntBASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC015909.3-201ENST00000572855 1794 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 RNA5SP359-201ENST00000364838 113 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 RPL8P2-201ENST00000430538 502 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC253536.4-201ENST00000440539 267 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC098935.1-201ENST00000446057 611 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 RPSAP15-201ENST00000448168 861 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 DUTP3-201ENST00000450025 415 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AP000358.1-201ENST00000456260 156 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC130709.1-201ENST00000484779 1212 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 RN7SL530P-201ENST00000485097 298 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC093752.3-201ENST00000567343 901 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 AC018635.2-201ENST00000608625 364 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms