Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN1P07384 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPN1P07384 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPN1P07384 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.33□□□□□ -0.12
CAPN1P07384 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN1P07384 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN1P07384 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPN1P07384 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CAPN1P07384 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN1P07384 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CAPN1P07384 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CAPN1P07384 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.32□□□□□ -0.12
CAPN1P07384 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.32□□□□□ -0.12
CAPN1P07384 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.32□□□□□ -0.12
CAPN1P07384 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.32□□□□□ -0.12
CAPN1P07384 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 GPAA1P2-201ENST00000417923 928 ntBASIC14.32□□□□□ -0.12
CAPN1P07384 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 AC006033.1-201ENST00000440505 426 ntBASIC14.32□□□□□ -0.12
CAPN1P07384 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.32□□□□□ -0.12
CAPN1P07384 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.32□□□□□ -0.12
CAPN1P07384 RPSAP36-202ENST00000494591 1261 ntBASIC14.32□□□□□ -0.12
CAPN1P07384 MESTP3-201ENST00000503460 968 ntBASIC14.32□□□□□ -0.12
CAPN1P07384 MIR3615-201ENST00000581999 87 ntBASIC14.32□□□□□ -0.12
CAPN1P07384 AL118558.3-201ENST00000607414 1079 ntBASIC14.32□□□□□ -0.12
CAPN1P07384 MIR6074-201ENST00000612054 107 ntBASIC14.32□□□□□ -0.12
CAPN1P07384 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CAPN1P07384 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CAPN1P07384 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CAPN1P07384 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPN1P07384 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPN1P07384 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.32□□□□□ -0.12
CAPN1P07384 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 CR383656.2-201ENST00000548656 2254 ntBASIC14.31□□□□□ -0.12
CAPN1P07384 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 AL354989.2-201ENST00000435838 1540 ntBASIC14.31□□□□□ -0.12
CAPN1P07384 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms