Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
APPP05067 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
APPP05067 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
APPP05067 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 AC126335.2-201ENST00000623362 4637 ntBASIC17.4■□□□□ 0.38
APPP05067 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
APPP05067 AL137784.3-201ENST00000623858 2288 ntBASIC17.4■□□□□ 0.38
APPP05067 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
APPP05067 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.4■□□□□ 0.38
APPP05067 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
APPP05067 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.4■□□□□ 0.38
APPP05067 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 AC005586.2-201ENST00000563946 837 ntBASIC17.4■□□□□ 0.38
APPP05067 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.4■□□□□ 0.38
APPP05067 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
APPP05067 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.4■□□□□ 0.38
APPP05067 AP000346.4-201ENST00000614827 381 ntBASIC17.4■□□□□ 0.38
APPP05067 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.4■□□□□ 0.38
APPP05067 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
APPP05067 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.4■□□□□ 0.38
APPP05067 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APPP05067 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
APPP05067 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
APPP05067 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.39■□□□□ 0.37
APPP05067 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC17.39■□□□□ 0.37
APPP05067 RN7SL832P-201ENST00000607781 1756 ntBASIC17.39■□□□□ 0.37
APPP05067 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
APPP05067 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 AC011742.3-201ENST00000439053 820 ntBASIC17.39■□□□□ 0.37
APPP05067 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.39■□□□□ 0.37
APPP05067 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.39■□□□□ 0.37
APPP05067 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.39■□□□□ 0.37
APPP05067 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.39■□□□□ 0.37
APPP05067 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.39■□□□□ 0.37
APPP05067 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.39■□□□□ 0.37
APPP05067 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.39■□□□□ 0.37
APPP05067 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.39■□□□□ 0.37
APPP05067 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
APPP05067 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
APPP05067 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
APPP05067 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.39■□□□□ 0.37
APPP05067 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.39■□□□□ 0.37
APPP05067 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APPP05067 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
APPP05067 AC015802.1-201ENST00000588104 1449 ntBASIC17.38■□□□□ 0.37
APPP05067 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
APPP05067 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APPP05067 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APPP05067 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.38■□□□□ 0.37
APPP05067 AC087386.2-201ENST00000623212 4637 ntBASIC17.38■□□□□ 0.37
APPP05067 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
APPP05067 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APPP05067 AC117489.1-201ENST00000625169 3217 ntBASIC17.38■□□□□ 0.37
APPP05067 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APPP05067 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APPP05067 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.38■□□□□ 0.37
APPP05067 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APPP05067 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.38■□□□□ 0.37
APPP05067 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APPP05067 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms