Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC093300.1-201ENST00000510368 1201 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 AC011431.1-201ENST00000512971 230 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.29□□□□□ -0.12
PDGFBP01127 AC004923.3-201ENST00000527532 355 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.29□□□□□ -0.12
PDGFBP01127 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 AC132812.1-201ENST00000583145 892 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 AC005777.1-201ENST00000588332 187 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 AC006986.1-201ENST00000612764 241 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 AC048382.6-201ENST00000621980 1223 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PDGFBP01127 LINC00115-201ENST00000473798 1317 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.29□□□□□ -0.12
PDGFBP01127 PCDHA1-201ENST00000378133 2726 ntBASIC14.29□□□□□ -0.12
PDGFBP01127 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.29□□□□□ -0.12
PDGFBP01127 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFBP01127 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFBP01127 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFBP01127 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDGFBP01127 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFBP01127 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFBP01127 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFBP01127 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDGFBP01127 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.28□□□□□ -0.12
PDGFBP01127 AC053503.3-201ENST00000448375 114 ntBASIC14.28□□□□□ -0.12
PDGFBP01127 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PDGFBP01127 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC14.28□□□□□ -0.12
PDGFBP01127 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC14.28□□□□□ -0.12
PDGFBP01127 ISL1-203ENST00000511384 981 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFBP01127 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFBP01127 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC14.28□□□□□ -0.12
PDGFBP01127 AP001462.1-201ENST00000594089 452 ntBASIC14.28□□□□□ -0.12
PDGFBP01127 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFBP01127 MIR6893-201ENST00000613458 69 ntBASIC14.28□□□□□ -0.12
PDGFBP01127 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.28□□□□□ -0.12
PDGFBP01127 AL391005.1-201ENST00000623953 2435 ntBASIC14.28□□□□□ -0.12
PDGFBP01127 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFBP01127 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDGFBP01127 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFBP01127 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFBP01127 AL513477.1-201ENST00000602865 2407 ntBASIC14.27□□□□□ -0.12
PDGFBP01127 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.27□□□□□ -0.12
PDGFBP01127 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PDGFBP01127 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms