Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PPP1R3DO95685 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PPP1R3DO95685 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PPP1R3DO95685 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 AC073548.1-201ENST00000624088 1882 ntBASIC13.11□□□□□ -0.31
PPP1R3DO95685 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.11□□□□□ -0.31
PPP1R3DO95685 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 AC132938.4-201ENST00000623835 848 ntBASIC13.11□□□□□ -0.31
PPP1R3DO95685 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PPP1R3DO95685 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP1R3DO95685 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 C2orf27AP3-201ENST00000434123 579 ntBASIC13.1□□□□□ -0.31
PPP1R3DO95685 CRB3P1-201ENST00000449338 276 ntBASIC13.1□□□□□ -0.31
PPP1R3DO95685 CICP12-201ENST00000455801 843 ntBASIC13.1□□□□□ -0.31
PPP1R3DO95685 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 RNA5SP486-201ENST00000515961 83 ntBASIC13.1□□□□□ -0.31
PPP1R3DO95685 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 AL354718.3-201ENST00000616414 581 ntBASIC13.1□□□□□ -0.31
PPP1R3DO95685 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 CR382287.1-201ENST00000623954 586 ntBASIC13.1□□□□□ -0.31
PPP1R3DO95685 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 PPT1-213ENST00000641319 2388 ntBASIC13.1□□□□□ -0.31
PPP1R3DO95685 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PPP1R3DO95685 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PPP1R3DO95685 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms