Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 RBM8B-201ENST00000555532 525 ntBASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 AC020922.3-201ENST00000595064 547 ntBASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPA3F8WFD2 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPA3F8WFD2 AC144522.1-201ENST00000625111 1658 ntBASIC13.21□□□□□ -0.3
NPIPA3F8WFD2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.21□□□□□ -0.3
NPIPA3F8WFD2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.21□□□□□ -0.3
NPIPA3F8WFD2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPA3F8WFD2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
NPIPA3F8WFD2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NPIPA3F8WFD2 AGGF1P1-201ENST00000509500 2073 ntBASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 AC091046.1-201ENST00000331871 207 ntBASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 AL353637.1-201ENST00000451571 732 ntBASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 AL133499.1-201ENST00000596207 608 ntBASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 AC012044.1-201ENST00000603431 297 ntBASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 AC079336.7-201ENST00000623428 1078 ntBASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 MIR193BHG-211ENST00000641433 5365 ntBASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 FAM45BP-202ENST00000592932 1624 ntBASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NPIPA3F8WFD2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC078875.1-201ENST00000431907 724 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms