Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 DUX4L46-201ENST00000566845 751 ntBASIC11.67□□□□□ -0.54
SRRM4A7MD48 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 AC105206.1-202ENST00000314927 2368 ntBASIC11.67□□□□□ -0.54
SRRM4A7MD48 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SRRM4A7MD48 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SRRM4A7MD48 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 AL645933.1-201ENST00000440087 609 ntBASIC11.66□□□□□ -0.54
SRRM4A7MD48 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.66□□□□□ -0.54
SRRM4A7MD48 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 MIR4783-201ENST00000580343 82 ntBASIC11.66□□□□□ -0.54
SRRM4A7MD48 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 AC132192.2-201ENST00000596206 1147 ntBASIC11.66□□□□□ -0.54
SRRM4A7MD48 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SRRM4A7MD48 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.66□□□□□ -0.54
SRRM4A7MD48 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRRM4A7MD48 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRRM4A7MD48 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SRRM4A7MD48 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRRM4A7MD48 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
SRRM4A7MD48 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRRM4A7MD48 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SRRM4A7MD48 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms