Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 AC064801.2-201ENST00000625052 1303 ntBASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 AC007274.2-201ENST00000421675 662 ntBASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 AC013355.1-201ENST00000562625 723 ntBASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 AC016397.2-201ENST00000624848 1985 ntBASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHB1Q9Y5F3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AC069218.1-201ENST00000435269 762 ntBASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AC106794.1-201ENST00000506935 792 ntBASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 DUX4L46-201ENST00000566845 751 ntBASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AC132192.2-201ENST00000596206 1147 ntBASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AF254983.2-201ENST00000612331 135 ntBASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AL023803.2-201ENST00000620080 638 ntBASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 AC012617.1-204ENST00000586340 2305 ntBASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms