Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SDHAP3-202ENST00000515467 728 ntBASIC12.43□□□□□ -0.42
COMMD9Q9P000 AC069262.1-201ENST00000539058 672 ntBASIC12.43□□□□□ -0.42
COMMD9Q9P000 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 AC010327.4-202ENST00000591484 748 ntBASIC12.43□□□□□ -0.42
COMMD9Q9P000 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 AF228730.6-201ENST00000641497 218 ntBASIC12.43□□□□□ -0.42
COMMD9Q9P000 AC084121.3-201ENST00000641716 218 ntBASIC12.43□□□□□ -0.42
COMMD9Q9P000 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
COMMD9Q9P000 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COMMD9Q9P000 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 AL512361.1-201ENST00000554200 418 ntBASIC12.42□□□□□ -0.42
COMMD9Q9P000 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 AC051619.7-201ENST00000568314 623 ntBASIC12.42□□□□□ -0.42
COMMD9Q9P000 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 TEX28P1-201ENST00000613479 1221 ntBASIC12.42□□□□□ -0.42
COMMD9Q9P000 TEX28P2-201ENST00000617764 1221 ntBASIC12.42□□□□□ -0.42
COMMD9Q9P000 SPDYE12P-201ENST00000618416 771 ntBASIC12.42□□□□□ -0.42
COMMD9Q9P000 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 RN7SL832P-201ENST00000607781 1756 ntBASIC12.42□□□□□ -0.42
COMMD9Q9P000 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COMMD9Q9P000 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
COMMD9Q9P000 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms