Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC011498.7-201ENST00000624986 2027 ntBASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC023794.5-201ENST00000564380 2157 ntBASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 HSPA8P5-201ENST00000456928 2069 ntBASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC106886.1-201ENST00000568660 600 ntBASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 BTNL10-201ENST00000595971 695 ntBASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC090643.2-201ENST00000623442 2029 ntBASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 AC079781.5-202ENST00000641784 3743 ntBASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
LIN7CQ9NUP9 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 AC073548.1-201ENST00000624088 1882 ntBASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 CICP16-201ENST00000502609 2813 ntBASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms