Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 HERC2P10-201ENST00000570209 2393 ntBASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.28□□□□□ -0.44
SEC22CQ9BRL7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC22CQ9BRL7 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 EMBP1-201ENST00000458200 901 ntBASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 UNC93B7-201ENST00000509439 705 ntBASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 AC000095.1-201ENST00000603208 874 ntBASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 AC026120.1-201ENST00000611536 926 ntBASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 AC003101.2-201ENST00000612557 442 ntBASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 GHET1-201ENST00000627071 1906 ntBASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC22CQ9BRL7 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 PI4KAP2-201ENST00000360806 2080 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms