Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 FAM90A21P-201ENST00000510875 1396 ntBASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 FAM90A15P-201ENST00000514465 1395 ntBASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 FAM90A6P-201ENST00000515148 1394 ntBASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 FAM90A16P-201ENST00000526662 1395 ntBASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 FAM90A9P-201ENST00000527940 1395 ntBASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 FAM90A5P-201ENST00000528738 1395 ntBASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 FAM90A14P-201ENST00000530386 1395 ntBASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 FAM90A13P-201ENST00000534703 1395 ntBASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC21.83■■□□□ 1.08
FYCO1Q9BQS8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 AL109809.1-201ENST00000418979 1367 ntBASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FYCO1Q9BQS8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 AC089987.1-201ENST00000551654 2209 ntBASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 ALG1L3P-201ENST00000503331 765 ntBASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 AC010632.2-201ENST00000588369 1224 ntBASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 FMO6P-201ENST00000236166 1620 ntBASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC21.81■■□□□ 1.08
FYCO1Q9BQS8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 SURF4-203ENST00000371991 715 ntTSL 3 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 AC026470.1-201ENST00000478038 846 ntBASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 AC100858.1-201ENST00000514059 1228 ntBASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 AC087203.1-201ENST00000532111 1181 ntBASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FYCO1Q9BQS8 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 AL512599.1-201ENST00000430724 685 ntBASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 AK2P2-201ENST00000439142 405 ntBASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 AC079250.1-201ENST00000456046 531 ntBASIC21.79■■□□□ 1.08
FYCO1Q9BQS8 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms