Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
VGLL1Q99990 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.07□□□□□ -0.64
VGLL1Q99990 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 NUTM2HP-201ENST00000442076 2498 ntBASIC11.07□□□□□ -0.64
VGLL1Q99990 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.07□□□□□ -0.64
VGLL1Q99990 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VGLL1Q99990 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 AC139712.1-201ENST00000378256 1875 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 AGAP10P-201ENST00000454844 2418 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
VGLL1Q99990 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
VGLL1Q99990 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 AC098850.1-201ENST00000419919 790 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 AC092183.1-201ENST00000469884 875 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 KRT18P25-201ENST00000508931 1278 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 RFPL4AP1-201ENST00000530883 850 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.06□□□□□ -0.64
VGLL1Q99990 AC123567.1-201ENST00000548294 1261 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.06□□□□□ -0.64
VGLL1Q99990 AC103988.2-201ENST00000561804 725 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
VGLL1Q99990 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.06□□□□□ -0.64
VGLL1Q99990 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.06□□□□□ -0.64
VGLL1Q99990 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 OR2I1P-208ENST00000641137 4948 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 AC020910.5-201ENST00000623668 1865 ntBASIC11.06□□□□□ -0.64
VGLL1Q99990 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
VGLL1Q99990 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
VGLL1Q99990 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VGLL1Q99990 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
VGLL1Q99990 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VGLL1Q99990 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
VGLL1Q99990 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms