Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 BTBD6P1-201ENST00000412176 1267 ntBASIC12.92□□□□□ -0.34
VRK1Q99986 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.92□□□□□ -0.34
VRK1Q99986 CD8B2-202ENST00000417670 633 ntBASIC12.92□□□□□ -0.34
VRK1Q99986 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.92□□□□□ -0.34
VRK1Q99986 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 FAM8A4P-201ENST00000435433 1213 ntBASIC12.92□□□□□ -0.34
VRK1Q99986 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VRK1Q99986 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 HOMER2P2-201ENST00000451621 847 ntBASIC12.92□□□□□ -0.34
VRK1Q99986 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.92□□□□□ -0.34
VRK1Q99986 AC108725.1-201ENST00000495472 409 ntBASIC12.92□□□□□ -0.34
VRK1Q99986 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.92□□□□□ -0.34
VRK1Q99986 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.92□□□□□ -0.34
VRK1Q99986 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 AP001267.2-201ENST00000532619 2086 ntBASIC12.92□□□□□ -0.34
VRK1Q99986 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VRK1Q99986 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 AC092053.3-201ENST00000641308 4975 ntBASIC12.91□□□□□ -0.34
VRK1Q99986 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VRK1Q99986 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 AC245100.3-201ENST00000441281 285 ntBASIC12.91□□□□□ -0.34
VRK1Q99986 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.91□□□□□ -0.34
VRK1Q99986 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.91□□□□□ -0.34
VRK1Q99986 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.91□□□□□ -0.34
VRK1Q99986 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.91□□□□□ -0.34
VRK1Q99986 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.91□□□□□ -0.34
VRK1Q99986 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.91□□□□□ -0.34
VRK1Q99986 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.91□□□□□ -0.34
VRK1Q99986 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VRK1Q99986 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VRK1Q99986 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VRK1Q99986 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.91□□□□□ -0.34
VRK1Q99986 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VRK1Q99986 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VRK1Q99986 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.91□□□□□ -0.34
VRK1Q99986 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VRK1Q99986 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VRK1Q99986 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VRK1Q99986 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms