Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 GCOM2-201ENST00000509133 1104 ntBASIC13.29□□□□□ -0.28
SNX18Q96RF0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 AL136172.1-201ENST00000598590 1394 ntBASIC13.29□□□□□ -0.28
SNX18Q96RF0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNX18Q96RF0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.29□□□□□ -0.28
SNX18Q96RF0 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 MESTP3-201ENST00000503460 968 ntBASIC13.28□□□□□ -0.28
SNX18Q96RF0 ALG3P1-201ENST00000508806 1114 ntBASIC13.28□□□□□ -0.28
SNX18Q96RF0 KRT17P8-201ENST00000540749 863 ntBASIC13.28□□□□□ -0.28
SNX18Q96RF0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 RAB43P1-201ENST00000561790 589 ntBASIC13.28□□□□□ -0.28
SNX18Q96RF0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 WFDC1-204ENST00000613603 549 ntBASIC13.28□□□□□ -0.28
SNX18Q96RF0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms