Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NLRP3Q96P20 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NLRP3Q96P20 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
NLRP3Q96P20 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NLRP3Q96P20 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.68■□□□□ 0.42
NLRP3Q96P20 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.68■□□□□ 0.42
NLRP3Q96P20 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NLRP3Q96P20 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 PCDHA3-202ENST00000532566 4594 ntBASIC17.67■□□□□ 0.42
NLRP3Q96P20 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AL139008.1-201ENST00000437894 228 ntBASIC17.67■□□□□ 0.42
NLRP3Q96P20 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AL512310.5-201ENST00000551999 515 ntBASIC17.67■□□□□ 0.42
NLRP3Q96P20 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.67■□□□□ 0.42
NLRP3Q96P20 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NLRP3Q96P20 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.66■□□□□ 0.42
NLRP3Q96P20 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 RN7SL375P-201ENST00000492442 298 ntBASIC17.66■□□□□ 0.42
NLRP3Q96P20 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 AC093826.1-201ENST00000508655 993 ntBASIC17.66■□□□□ 0.42
NLRP3Q96P20 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 AC244250.3-201ENST00000620749 366 ntBASIC17.66■□□□□ 0.42
NLRP3Q96P20 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 RPL13AP3-202ENST00000494676 1473 ntBASIC17.66■□□□□ 0.42
NLRP3Q96P20 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.66■□□□□ 0.42
NLRP3Q96P20 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NLRP3Q96P20 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms