Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RNF138Q8WVD3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RNF138Q8WVD3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RNF138Q8WVD3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
RNF138Q8WVD3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
RNF138Q8WVD3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AL583805.1-201ENST00000391389 531 ntBASIC12.89□□□□□ -0.35
RNF138Q8WVD3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AC098934.1-203ENST00000442868 1262 ntBASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 UPF3AP2-201ENST00000457924 1132 ntBASIC12.89□□□□□ -0.35
RNF138Q8WVD3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 SLC25A15P3-201ENST00000505530 290 ntBASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AC134698.3-201ENST00000523880 214 ntBASIC12.89□□□□□ -0.35
RNF138Q8WVD3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 CR392039.2-201ENST00000623182 509 ntBASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AC009145.4-201ENST00000625119 1294 ntBASIC12.89□□□□□ -0.35
RNF138Q8WVD3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF138Q8WVD3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 AL807761.2-201ENST00000422849 729 ntBASIC12.88□□□□□ -0.35
RNF138Q8WVD3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 RPL18AP8-201ENST00000486071 528 ntBASIC12.88□□□□□ -0.35
RNF138Q8WVD3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.88□□□□□ -0.35
RNF138Q8WVD3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms