Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNED1Q8TER0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNED1Q8TER0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 SERBP1P2-201ENST00000436888 1164 ntBASIC17.19■□□□□ 0.34
SNED1Q8TER0 AC025594.1-201ENST00000469533 543 ntBASIC17.19■□□□□ 0.34
SNED1Q8TER0 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 AC022447.6-201ENST00000515522 438 ntBASIC17.19■□□□□ 0.34
SNED1Q8TER0 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 AL359219.1-201ENST00000556311 934 ntBASIC17.19■□□□□ 0.34
SNED1Q8TER0 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 TYMSP2-201ENST00000589501 424 ntBASIC17.19■□□□□ 0.34
SNED1Q8TER0 AL049840.2-201ENST00000602722 535 ntBASIC17.19■□□□□ 0.34
SNED1Q8TER0 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.19■□□□□ 0.34
SNED1Q8TER0 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.19■□□□□ 0.34
SNED1Q8TER0 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNED1Q8TER0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SNED1Q8TER0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 AP000354.1-201ENST00000396982 456 ntBASIC17.18■□□□□ 0.34
SNED1Q8TER0 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 IFNWP2-201ENST00000431203 580 ntBASIC17.18■□□□□ 0.34
SNED1Q8TER0 NRADDP-201ENST00000437305 691 ntBASIC17.18■□□□□ 0.34
SNED1Q8TER0 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 AL512310.5-201ENST00000551999 515 ntBASIC17.18■□□□□ 0.34
SNED1Q8TER0 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 ANKRD26P1-203ENST00000569528 966 ntBASIC17.18■□□□□ 0.34
SNED1Q8TER0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNED1Q8TER0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SNED1Q8TER0 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 AC015909.5-201ENST00000624336 2266 ntBASIC17.17■□□□□ 0.34
SNED1Q8TER0 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms