Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 KRT8P31-201ENST00000504812 1408 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 OR2K2-202ENST00000374428 1038 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 AC007274.2-201ENST00000421675 662 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 AL133466.1-201ENST00000447582 150 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 RN7SL769P-201ENST00000469386 295 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 RTN3P1-201ENST00000536295 711 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 AL512310.5-201ENST00000551999 515 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 KRT8P1-201ENST00000557533 1207 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 AC106872.11-201ENST00000605838 421 ntBASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ARHGEF39Q8N4T4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 KRT8P19-201ENST00000551916 1455 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AL365209.1-201ENST00000624418 6473 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AC026320.2-201ENST00000434379 478 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 RPSAP15-201ENST00000448168 861 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 CEP164P1-201ENST00000455142 418 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 FGFR3P5-201ENST00000564496 886 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AL133499.1-201ENST00000596207 608 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AL606495.2-201ENST00000605867 535 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 LINC01783-202ENST00000614408 828 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 BX284668.2-205ENST00000619677 828 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 AC006453.1-201ENST00000636037 1257 ntBASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ARHGEF39Q8N4T4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms