Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 FRMPD2B-201ENST00000431305 1347 ntBASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 FER1L4-210ENST00000615531 5998 ntBASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 RN7SL81P-201ENST00000493781 261 ntBASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 DNM1P51-201ENST00000558149 522 ntBASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RP1L1Q8IWN7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 RPSAP15-201ENST00000448168 861 ntBASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AC004837.1-201ENST00000446267 564 ntBASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AC011247.3-201ENST00000603297 438 ntBASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 AC002472.4-201ENST00000641915 272 ntBASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RP1L1Q8IWN7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 SALL4P5-201ENST00000419001 1760 ntBASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 LINC01101-201ENST00000622953 1884 ntBASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.15□□□□□ -0.3
RP1L1Q8IWN7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms