Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 AP001462.1-201ENST00000594089 452 ntBASIC11.64□□□□□ -0.55
VPS13CQ709C8 GGNBP1-204ENST00000613113 887 ntBASIC11.64□□□□□ -0.55
VPS13CQ709C8 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 FGD5P1-202ENST00000614866 2498 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 OLA1P2-201ENST00000395519 1264 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 SRPK2P-201ENST00000523408 1100 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 RN7SL121P-201ENST00000584223 273 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 AC099328.1-201ENST00000498809 1030 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 AP006248.1-201ENST00000610471 67 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 AC068760.1-201ENST00000493579 1953 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13CQ709C8 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 GRPEL2P1-201ENST00000453145 339 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC11.63□□□□□ -0.55
VPS13CQ709C8 RN7SKP155-201ENST00000516031 288 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 MIR6893-201ENST00000613458 69 ntBASIC11.63□□□□□ -0.55
VPS13CQ709C8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC022447.5-201ENST00000504817 392 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC004923.3-201ENST00000527532 355 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC120498.5-201ENST00000561757 299 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AL049840.2-201ENST00000602722 535 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 AL021707.6-201ENST00000609212 491 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 CICP24-201ENST00000605464 2705 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 TMA16-204ENST00000508268 608 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC233724.9-201ENST00000511694 407 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC007952.5-201ENST00000572818 1486 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 MST1P2-201ENST00000457982 2291 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms