Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 AP000845.1-201ENST00000581677 2131 ntBASIC16.63■□□□□ 0.25
CHMP4BP1P59074 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 MTHFR-210ENST00000641407 2387 ntBASIC16.63■□□□□ 0.25
CHMP4BP1P59074 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP4BP1P59074 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 KLF2P1-201ENST00000447438 1042 ntBASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AC125604.1-201ENST00000496255 707 ntBASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP4BP1P59074 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms