Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1LP55160 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1LP55160 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1LP55160 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1LP55160 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1LP55160 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1LP55160 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.76■□□□□ 0.11
NCKAP1LP55160 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1LP55160 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1LP55160 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 SHMT1P1-201ENST00000419974 1312 ntBASIC15.75■□□□□ 0.11
NCKAP1LP55160 FRMPD2B-201ENST00000431305 1347 ntBASIC15.75■□□□□ 0.11
NCKAP1LP55160 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 AC103592.1-201ENST00000394513 664 ntBASIC15.75■□□□□ 0.11
NCKAP1LP55160 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 RN7SL530P-201ENST00000485097 298 ntBASIC15.75■□□□□ 0.11
NCKAP1LP55160 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 AL161670.2-201ENST00000557650 1227 ntBASIC15.75■□□□□ 0.11
NCKAP1LP55160 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 BRD7P5-201ENST00000299197 1822 ntBASIC15.75■□□□□ 0.11
NCKAP1LP55160 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NCKAP1LP55160 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCKAP1LP55160 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.74■□□□□ 0.11
NCKAP1LP55160 LINC00115-201ENST00000473798 1317 ntBASIC15.74■□□□□ 0.11
NCKAP1LP55160 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 BAP1-211ENST00000615113 489 ntBASIC15.74■□□□□ 0.11
NCKAP1LP55160 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 AC104581.4-201ENST00000623126 3052 ntBASIC15.74■□□□□ 0.11
NCKAP1LP55160 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1LP55160 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1LP55160 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms