Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDK8P49336 AL591122.2-201ENST00000624125 1853 ntBASIC16.82■□□□□ 0.28
CDK8P49336 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDK8P49336 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.82■□□□□ 0.28
CDK8P49336 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK8P49336 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CDK8P49336 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CDK8P49336 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDK8P49336 AL596257.1-201ENST00000641463 2694 ntBASIC16.81■□□□□ 0.28
CDK8P49336 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.81■□□□□ 0.28
CDK8P49336 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 RN7SL81P-201ENST00000493781 261 ntBASIC16.81■□□□□ 0.28
CDK8P49336 ORAOV1P1-201ENST00000503108 395 ntBASIC16.81■□□□□ 0.28
CDK8P49336 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK8P49336 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK8P49336 AC005740.1-201ENST00000515639 522 ntBASIC16.81■□□□□ 0.28
CDK8P49336 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDK8P49336 IQSEC3P1-201ENST00000538799 536 ntBASIC16.81■□□□□ 0.28
CDK8P49336 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.81■□□□□ 0.28
CDK8P49336 NDUFB10P1-201ENST00000567319 521 ntBASIC16.81■□□□□ 0.28
CDK8P49336 RN7SL555P-201ENST00000584742 339 ntBASIC16.81■□□□□ 0.28
CDK8P49336 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.81■□□□□ 0.28
CDK8P49336 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK8P49336 AL133467.4-201ENST00000602953 725 ntBASIC16.81■□□□□ 0.28
CDK8P49336 AL021707.6-201ENST00000609212 491 ntBASIC16.81■□□□□ 0.28
CDK8P49336 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 AP001184.1-201ENST00000637936 376 ntBASIC16.81■□□□□ 0.28
CDK8P49336 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK8P49336 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK8P49336 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK8P49336 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDK8P49336 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK8P49336 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK8P49336 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK8P49336 BX640514.1-201ENST00000583223 1918 ntBASIC16.8■□□□□ 0.28
CDK8P49336 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK8P49336 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CDK8P49336 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 AC006987.1-201ENST00000413610 527 ntBASIC16.8■□□□□ 0.28
CDK8P49336 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 AP002803.1-201ENST00000528836 498 ntBASIC16.8■□□□□ 0.28
CDK8P49336 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK8P49336 RPL17P45-201ENST00000586289 509 ntBASIC16.8■□□□□ 0.28
CDK8P49336 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDK8P49336 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 COX6A1P2-201ENST00000620597 330 ntBASIC16.8■□□□□ 0.28
CDK8P49336 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK8P49336 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK8P49336 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDK8P49336 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms