Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFC1P35251 TCAM1P-207ENST00000485295 1537 ntBASIC15.29■□□□□ 0.04
RFC1P35251 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.29■□□□□ 0.04
RFC1P35251 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 AC079178.1-201ENST00000420915 656 ntBASIC15.29■□□□□ 0.04
RFC1P35251 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.29■□□□□ 0.04
RFC1P35251 IGHV3-71-201ENST00000523324 359 ntBASIC15.29■□□□□ 0.04
RFC1P35251 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFC1P35251 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.29■□□□□ 0.04
RFC1P35251 AC239800.4-201ENST00000603712 296 ntBASIC15.29■□□□□ 0.04
RFC1P35251 AC104506.1-201ENST00000609247 429 ntBASIC15.29■□□□□ 0.04
RFC1P35251 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 AC011474.4-201ENST00000623523 2076 ntBASIC15.29■□□□□ 0.04
RFC1P35251 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RFC1P35251 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.29■□□□□ 0.04
RFC1P35251 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.28■□□□□ 0.04
RFC1P35251 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 AL008718.2-201ENST00000609206 1313 ntBASIC15.28■□□□□ 0.04
RFC1P35251 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RFC1P35251 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.28■□□□□ 0.04
RFC1P35251 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.28■□□□□ 0.04
RFC1P35251 EEF1DP1-201ENST00000585891 896 ntBASIC15.28■□□□□ 0.04
RFC1P35251 MIR6805-201ENST00000615055 62 ntBASIC15.28■□□□□ 0.04
RFC1P35251 AL162426.1-201ENST00000624141 743 ntBASIC15.28■□□□□ 0.04
RFC1P35251 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.28■□□□□ 0.04
RFC1P35251 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RFC1P35251 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFC1P35251 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 AL022313.4-201ENST00000562756 2046 ntBASIC15.27■□□□□ 0.04
RFC1P35251 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.27■□□□□ 0.04
RFC1P35251 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.27■□□□□ 0.04
RFC1P35251 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RFC1P35251 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RFC1P35251 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.27■□□□□ 0.04
RFC1P35251 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC15.27■□□□□ 0.04
RFC1P35251 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.27■□□□□ 0.04
RFC1P35251 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.27■□□□□ 0.04
RFC1P35251 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFC1P35251 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.27■□□□□ 0.04
RFC1P35251 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.27■□□□□ 0.04
RFC1P35251 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.27■□□□□ 0.04
RFC1P35251 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms