Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TUBB2BP1-201ENST00000404155 871 ntBASIC19.77■□□□□ 0.76
CPS1P31327 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CPS1P31327 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC19.77■□□□□ 0.76
CPS1P31327 OR4C14P-201ENST00000440929 923 ntBASIC19.77■□□□□ 0.76
CPS1P31327 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC19.77■□□□□ 0.76
CPS1P31327 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC19.77■□□□□ 0.76
CPS1P31327 PSME2P2-201ENST00000453033 700 ntBASIC19.77■□□□□ 0.76
CPS1P31327 TPT1P11-201ENST00000458482 498 ntBASIC19.77■□□□□ 0.76
CPS1P31327 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 BOLA3P2-201ENST00000586496 323 ntBASIC19.77■□□□□ 0.76
CPS1P31327 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.77■□□□□ 0.76
CPS1P31327 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.77■□□□□ 0.76
CPS1P31327 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.77■□□□□ 0.76
CPS1P31327 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC19.77■□□□□ 0.75
CPS1P31327 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.77■□□□□ 0.75
CPS1P31327 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CPS1P31327 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPS1P31327 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CPS1P31327 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPS1P31327 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CPS1P31327 HNRNPABP1-201ENST00000406003 734 ntBASIC19.76■□□□□ 0.75
CPS1P31327 RPL10-203ENST00000406022 748 ntTSL 3 BASIC19.76■□□□□ 0.75
CPS1P31327 AC092810.2-201ENST00000431570 362 ntBASIC19.76■□□□□ 0.75
CPS1P31327 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC19.76■□□□□ 0.75
CPS1P31327 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19.76■□□□□ 0.75
CPS1P31327 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.76■□□□□ 0.75
CPS1P31327 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CPS1P31327 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CPS1P31327 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC19.76■□□□□ 0.75
CPS1P31327 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.76■□□□□ 0.75
CPS1P31327 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.76■□□□□ 0.75
CPS1P31327 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.76■□□□□ 0.75
CPS1P31327 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.76■□□□□ 0.75
CPS1P31327 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.76■□□□□ 0.75
CPS1P31327 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.76■□□□□ 0.75
CPS1P31327 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CPS1P31327 PHBP10-201ENST00000416467 784 ntBASIC19.76■□□□□ 0.75
CPS1P31327 CCND3P1-201ENST00000438347 580 ntBASIC19.76■□□□□ 0.75
CPS1P31327 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC19.76■□□□□ 0.75
CPS1P31327 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.76■□□□□ 0.75
CPS1P31327 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPS1P31327 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC19.76■□□□□ 0.75
CPS1P31327 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC19.76■□□□□ 0.75
CPS1P31327 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CPS1P31327 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.75■□□□□ 0.75
CPS1P31327 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CPS1P31327 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CPS1P31327 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CPS1P31327 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC19.75■□□□□ 0.75
CPS1P31327 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CPS1P31327 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CPS1P31327 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC19.75■□□□□ 0.75
CPS1P31327 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC19.75■□□□□ 0.75
CPS1P31327 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 AC011498.7-201ENST00000624986 2027 ntBASIC19.75■□□□□ 0.75
CPS1P31327 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPS1P31327 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CPS1P31327 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms