Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PTX3P26022 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 TMBIM7P-202ENST00000641474 1516 ntBASIC13.92□□□□□ -0.18
PTX3P26022 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.92□□□□□ -0.18
PTX3P26022 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.92□□□□□ -0.18
PTX3P26022 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 AL157407.1-201ENST00000435784 904 ntBASIC13.92□□□□□ -0.18
PTX3P26022 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.92□□□□□ -0.18
PTX3P26022 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.92□□□□□ -0.18
PTX3P26022 AC009955.4-201ENST00000597192 544 ntBASIC13.92□□□□□ -0.18
PTX3P26022 AC009884.2-201ENST00000603110 324 ntBASIC13.92□□□□□ -0.18
PTX3P26022 AC133552.6-201ENST00000613406 534 ntBASIC13.92□□□□□ -0.18
PTX3P26022 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.92□□□□□ -0.18
PTX3P26022 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.92□□□□□ -0.18
PTX3P26022 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.92□□□□□ -0.18
PTX3P26022 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PTX3P26022 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.92□□□□□ -0.18
PTX3P26022 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTX3P26022 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.92□□□□□ -0.18
PTX3P26022 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 TUBB8P4-201ENST00000511806 1324 ntBASIC13.91□□□□□ -0.18
PTX3P26022 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.91□□□□□ -0.18
PTX3P26022 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.91□□□□□ -0.18
PTX3P26022 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PTX3P26022 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.91□□□□□ -0.18
PTX3P26022 AC099336.1-201ENST00000417053 1171 ntBASIC13.91□□□□□ -0.18
PTX3P26022 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.91□□□□□ -0.18
PTX3P26022 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.91□□□□□ -0.18
PTX3P26022 AC022210.1-201ENST00000449856 793 ntBASIC13.91□□□□□ -0.18
PTX3P26022 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.91□□□□□ -0.18
PTX3P26022 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 RBM8B-201ENST00000555532 525 ntBASIC13.91□□□□□ -0.18
PTX3P26022 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PTX3P26022 AC100827.2-201ENST00000563214 1194 ntBASIC13.91□□□□□ -0.18
PTX3P26022 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.91□□□□□ -0.18
PTX3P26022 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PTX3P26022 EEF1DP1-201ENST00000585891 896 ntBASIC13.91□□□□□ -0.18
PTX3P26022 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.91□□□□□ -0.18
PTX3P26022 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 AC017083.2-201ENST00000608069 979 ntBASIC13.91□□□□□ -0.18
PTX3P26022 COX11-210ENST00000639671 696 ntBASIC13.91□□□□□ -0.18
PTX3P26022 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.91□□□□□ -0.18
PTX3P26022 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTX3P26022 AC244394.1-201ENST00000435000 1665 ntBASIC13.91□□□□□ -0.18
PTX3P26022 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms